From ebca57adfd17ee17719fc8b9ac8109f796796dc4 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Mon, 20 Nov 2017 18:14:40 -0600
Subject: [PATCH] Fix assignment for multiple experiments.
---
workflow/main.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/main.nf b/workflow/main.nf
index 8a50107..6133482 100644
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -320,7 +320,7 @@ experimentRows = experimentPoolObjs
.collect()
.splitCsv(sep:'\t', header: true)
.flatten()
- .map { row -> [ row.sample_id, row.tag_align, row.xcor, row.experiment_id, row.biosample, row.factor, row.treatment, row.replicate, row.control_id, row.control_tag_align] }
+ .map { row -> [ row[0], row[1], row[2], row[3], row[4], row[5], row[6], row[7], row[8], row[8]] }
// Call Peaks using MACS
process callPeaksMACS {
--
GitLab