diff --git a/workflow/main.nf b/workflow/main.nf index 8a50107544eef5ae486f0a570921be3ed54113c1..613348288ca6e9ee6ab29d10fdab26cd785ce51c 100644 --- a/workflow/main.nf +++ b/workflow/main.nf @@ -320,7 +320,7 @@ experimentRows = experimentPoolObjs .collect() .splitCsv(sep:'\t', header: true) .flatten() - .map { row -> [ row.sample_id, row.tag_align, row.xcor, row.experiment_id, row.biosample, row.factor, row.treatment, row.replicate, row.control_id, row.control_tag_align] } + .map { row -> [ row[0], row[1], row[2], row[3], row[4], row[5], row[6], row[7], row[8], row[8]] } // Call Peaks using MACS process callPeaksMACS {