diff --git a/CHANGELOG.md b/CHANGELOG.md index cb898370879238045e20bba88e38d1617dd41d69..99f5a5c6dddd9c015c86cbc3fe5f110fbfee7bd9 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -3,6 +3,8 @@ All notable changes to this project will be documented in this file. ## [Unreleased] +- Fix references.md link in citation of README.md +- Add Nextflow to references.md ## [publish_1.0.6 ] - 2019-05-31 ### Added diff --git a/README.md b/README.md index 39f934a388e6fd3e7e63ad65dd20efd5f05d6bb9..e2361654d9dda12c7692d8bd1f8e8edd95f0fda4 100644 --- a/README.md +++ b/README.md @@ -130,7 +130,7 @@ diffPeaks | *_diffbind.csv | Use only for replicated samples; CSV file of peaks If you find an error, please let the [BICF](mailto:BICF@UTSouthwestern.edu) know and we will add it here. ## Citation -Please cite individual programs and versions used [HERE](docs/references.txt), and the pipeline doi:[10.5281/zenodo.2648844](https://doi.org/10.5281/zenodo.2648844). Please cite in publications: Pipeline was developed by BICF from funding provided by Cancer Prevention and Research Institute of Texas (RP150596). +Please cite individual programs and versions used [HERE](docs/references.md), and the pipeline doi:[10.5281/zenodo.2648844](https://doi.org/10.5281/zenodo.2648844). Please cite in publications: Pipeline was developed by BICF from funding provided by Cancer Prevention and Research Institute of Texas (RP150596). ## Programs and Versions + python/3.6.1-2-anaconda [website](https://www.anaconda.com/download/#linux) [citation](docs/references.txt) diff --git a/docs/references.md b/docs/references.md index c30998cc6a1ccc6e2f48c593b44cf066f49f7ff8..e3f78fbe6f21627624ac65da054912e061a0acf3 100644 --- a/docs/references.md +++ b/docs/references.md @@ -54,4 +54,7 @@ 17. **BICF ChIP-seq Analysis Workflow**: * Spencer D. Barnes, Holly Ruess, Jeremy A. Mathews, Beibei Chen, & Venkat S. Malladi. (2019). BICF ChIP-seq Analysis Workflow (publish_1.0.5). Zenodo. doi:[10.5281/zenodo.2648844](https://doi.org/10.5281/zenodo.2648844) +18. **Nextflow**: + * Di Tommaso, P., Chatzou, M., Floden, E. W., Barja, P. P., Palumbo, E., & Notredame, C. (2017). Nextflow enables reproducible computational workflows. Nature biotechnology, 35(4), 316. + Please cite in publications: Pipeline was developed by BICF from funding provided by **Cancer Prevention and Research Institute of Texas (RP150596)**.