diff --git a/CHANGELOG.md b/CHANGELOG.md index 1d925fc36ed07e44b0aec721c16771b7684418d5..64852347380afbe9d3bc02cfe05e04af815df0e6 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -2,6 +2,9 @@ All notable changes to this project will be documented in this file. +## [publish_1.1.2 ] - 2020-06-22 +- Add pipeline tracking + ## [publish_1.1.1 ] - 2020-04-23 ### Added - Add Nextflow to references.md diff --git a/README.md b/README.md index 65a0d7a23f620fe66e56e17c3e4f29b00f6b7557..0eccb2c3054f2c9808d6815ebfda5ddfeb9c36d8 100644 --- a/README.md +++ b/README.md @@ -1,6 +1,6 @@ # **ChIP-seq Manual** -## Version 1.1.1 -## April 22, 2020 +## Version 1.1.2 +## June 21, 2020 # BICF ChIP-seq Pipeline diff --git a/docs/references.md b/docs/references.md index 1f0f91a39659ced9352842b222ca6765b59707b1..4c6a2dfd54aa58be14dad6035e31acea9a2ba386 100644 --- a/docs/references.md +++ b/docs/references.md @@ -52,7 +52,7 @@ * Ewels P., Magnusson M., Lundin S. and Käller M. 2016. MultiQC: Summarize analysis results for multiple tools and samples in a single report. Bioinformatics 32(19): 3047–3048. doi:[10.1093/bioinformatics/btw354](https://dx.doi.org/10.1093/bioinformatics/btw354) 17. **BICF ChIP-seq Analysis Workflow**: - * Spencer D. Barnes, Holly Ruess, Jeremy A. Mathews, Beibei Chen, and Venkat S. Malladi. 2020. BICF ChIP-seq Analysis Workflow (publish_1.1.1). Zenodo. doi:[10.5281/zenodo.3759481](https://doi.org/10.5281/zenodo.3759481) + * Spencer D. Barnes, Holly Ruess, Jeremy A. Mathews, Beibei Chen, and Venkat S. Malladi. 2020. BICF ChIP-seq Analysis Workflow (publish_1.1.2). Zenodo. doi:[10.5281/zenodo.3903277](https://doi.org/10.5281/zenodo.3903277) 18. **Nextflow**: * Di Tommaso, P., Chatzou, M., Floden, E. W., Barja, P. P., Palumbo, E., and Notredame, C. 2017. Nextflow enables reproducible computational workflows. Nature biotechnology, 35(4), 316. diff --git a/workflow/main.nf b/workflow/main.nf index 58361612463eeabe39a11c197ffe83383bdeac73..108ec1b0dd06e3375bf7bab64204b2ad8d437c88 100644 --- a/workflow/main.nf +++ b/workflow/main.nf @@ -121,7 +121,7 @@ process trackStart { "astrocyte": ${params.astrocyte}, \ "status": "started", \ "nextflowVersion": "${workflow.nextflow.version}", \ - "pipelineVersion": "1.1.1", \ + "pipelineVersion": "1.1.2", \ "ci": ${params.ci}, \ "dev": ${params.dev}}' \ "https://xku43pcwnf.execute-api.us-east-1.amazonaws.com/ProdDeploy/pipeline-tracking" diff --git a/workflow/nextflow.config b/workflow/nextflow.config index 06a568545646bb0a01bba5840218487e57eacf97..de9b85cadffd8fd94750ef7b642dbbc42ab04e92 100644 --- a/workflow/nextflow.config +++ b/workflow/nextflow.config @@ -25,7 +25,7 @@ manifest { name = 'chipseq_analysis' description = 'BICF ChIP-seq Analysis Workflow.' homePage = 'https://git.biohpc.swmed.edu/BICF/Astrocyte/chipseq_analysis' - version = '1.1.1' + version = '1.1.2' mainScript = 'main.nf' nextflowVersion = '>=0.31.0' }