From e38a082dd43737c27cf77672a94104d4936c7033 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Sat, 7 Oct 2017 22:11:23 -0500
Subject: [PATCH] Fix the output directory name.
---
workflow/main.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/main.nf b/workflow/main.nf
index 9b9980e..fedefa7 100644
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -104,7 +104,7 @@ process trimReads {
process alignReads {
tag "$sampleId-$replicate"
- publishDir "$baseDir/output/{task.process}", mode: 'copy'
+ publishDir "$baseDir/output/${task.process}", mode: 'copy'
input:
--
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