diff --git a/workflow/main.nf b/workflow/main.nf index 51c5e795f071c3622a74bf3b47db42d1a9dccc5f..1365f8cd9fab863a5140cb4a1b572064b1fced63 100644 --- a/workflow/main.nf +++ b/workflow/main.nf @@ -491,17 +491,17 @@ process softwareReport { input: - file trimReads_vf from trimReadsVersions.collect() - file alignReads_vf from alignReadsVersions.collect() - file filterReads_vf from filterReadsVersions.collect() - file convertReads_vf from convertReadsVersions.collect() - file crossReads_vf from crossReadsVersions.collect() - file callPeaksMACS_vf from callPeaksMACSVersions.collect() - file consensusPeaks_vf from consensusPeaksVersions.collect() - file peakAnnotation_vf from peakAnnotationVersions.collect() - file motifSearch_vf from motifSearchVersions.collect().ifEmpty([]) - file diffPeaks_vf from diffPeaksVersions.collect().ifEmpty([]) - file experimentQC_vf from experimentQCVersions.collect() + file trimReads_vf from trimReadsVersions.first() + file alignReads_vf from alignReadsVersions.first() + file filterReads_vf from filterReadsVersions.first() + file convertReads_vf from convertReadsVersions.first() + file crossReads_vf from crossReadsVersions.first() + file callPeaksMACS_vf from callPeaksMACSVersions.first() + file consensusPeaks_vf from consensusPeaksVersions.first() + file peakAnnotation_vf from peakAnnotationVersions.first() + file motifSearch_vf from motifSearchVersions.first().ifEmpty() + file diffPeaks_vf from diffPeaksVersions.first().ifEmpty() + file experimentQC_vf from experimentQCVersions.first() output: