diff --git a/workflow/main.nf b/workflow/main.nf index 63c2c2b5166bb5bee01d9517d24b7562674cb32e..8425afc44b97be85c7eed27d622bcc37ca33affd 100644 --- a/workflow/main.nf +++ b/workflow/main.nf @@ -117,6 +117,7 @@ process run_meme_original { """ module load python/2.7.x-anaconda module load R/3.3.2-gccmkl + module add deeptools/2.3.5 module load meme/4.11.1-gcc-openmpi python $baseDir/scripts/runMemechip.py -i $design_meme -g ${params.genomepath} -l ${toppeakcount} """ @@ -133,6 +134,7 @@ process run_meme_diffpeak { """ module load python/2.7.x-anaconda module load R/3.3.2-gccmkl + module add deeptools/2.3.5 module load meme/4.11.1-gcc-openmpi python $baseDir/scripts/runMemechip.py -i $diffpeak_design -g ${params.genomepath} -l ${toppeakcount} """