From cd167def1f33a5249456860f79d59164a1c5a278 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Mon, 6 May 2019 15:28:06 -0500
Subject: [PATCH] Fix association of file path.
---
workflow/main.nf | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/workflow/main.nf b/workflow/main.nf
index 676a1a7..de87ca9 100644
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -57,7 +57,7 @@ readsList = Channel
// Define regular variables
pairedEnd = params.pairedEnd
-designFile = params.designFile
+designFile = Channel.fromPath(params.designFile)
genomeSize = params.genomeSize
genome = params.genome
chromSizes = params.chromSizes
@@ -78,8 +78,8 @@ process checkDesignFile {
input:
- file designFile
- file readsList
+ designFile
+ readsList
output:
--
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