diff --git a/workflow/main.nf b/workflow/main.nf index 664ed7cef90611bf350978d7c69c52310e78178f..0e07dd5e8bf6ff568eef02e7ccc7f4968bebc1a5 100644 --- a/workflow/main.nf +++ b/workflow/main.nf @@ -167,7 +167,7 @@ process filterReads { dedupDesign = dedupReads .map{ sampleId, bam, bai, biosample, factor, treatment, replicate, controlId -> "$sampleId\t$bam\t$bai\t$biosample\t$factor\t$treatment\t$replicate\t$controlId\n"} - .collectFile(name:'design_dedup.tsv', seed:"sample_id\tbam_reads\tbam_index\tbiosample\tfactor\ttreatment\treplicate\tcontrolId\n", storeDir:"$baseDir/output/design") + .collectFile(name:'design_dedup.tsv', seed:"sample_id\tbam_reads\tbam_index\tbiosample\tfactor\ttreatment\treplicate\tcontrol_id\n", storeDir:"$baseDir/output/design") // Quality Metrics using deeptools process experimentQC {