From b59f7e0cd64b5d783ce6575fd6409875ff22b84a Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Sun, 8 Oct 2017 19:59:21 -0500
Subject: [PATCH] Change genome to GRCm38 to reflect data.

---
 workflow/main.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/workflow/main.nf b/workflow/main.nf
index 721e61a..05da69c 100644
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -7,7 +7,7 @@
 params.reads = "$baseDir/../test_data/*.fastq.gz"
 params.pairedEnd = false
 params.designFile = "$baseDir/../test_data/design_ENCSR238SGC_SE.txt"
-params.genome = 'GRCh38'
+params.genome = 'GRCm38'
 params.genomes = []
 params.bwaIndex = params.genome ? params.genomes[ params.genome ].bwa ?: false : false
 
-- 
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