From ae75a1a742f90741ac7dcc2ac976205f68b7718d Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Fri, 15 Mar 2019 10:20:45 -0500
Subject: [PATCH] Fix use of tool.
---
workflow/scripts/overlap_peaks.py | 3 +++
1 file changed, 3 insertions(+)
diff --git a/workflow/scripts/overlap_peaks.py b/workflow/scripts/overlap_peaks.py
index cd71c5a..bdcfcee 100644
--- a/workflow/scripts/overlap_peaks.py
+++ b/workflow/scripts/overlap_peaks.py
@@ -188,6 +188,9 @@ def main():
handler = logging.FileHandler('consensus_peaks.log')
logger.addHandler(handler)
+ # Check if tools are present
+ check_tools()
+
# Read files as dataframes
design_peaks_df = pd.read_csv(design, sep='\t')
design_files_df = pd.read_csv(files, sep='\t')
--
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