From a9bc75366c42e0800546e832abdc665e9ba23b7b Mon Sep 17 00:00:00 2001 From: Jeremy Mathews <Jeremy.Mathews@utsouthwestern.edu> Date: Fri, 12 Jul 2019 09:53:00 -0500 Subject: [PATCH] Update CHANGELOG.md and index.md --- CHANGELOG.md | 1 + docs/index.md | 3 +++ 2 files changed, 4 insertions(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 99f5a5c..794ede9 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -5,6 +5,7 @@ All notable changes to this project will be documented in this file. ## [Unreleased] - Fix references.md link in citation of README.md - Add Nextflow to references.md +- Fix pool_and_psuedoreplicate.py to run single experiment ## [publish_1.0.6 ] - 2019-05-31 ### Added diff --git a/docs/index.md b/docs/index.md index 18ae6ed..08d678c 100644 --- a/docs/index.md +++ b/docs/index.md @@ -123,3 +123,6 @@ Please cite in publications: Pipeline was developed by BICF from funding provide + meme/4.11.1-gcc-openmpi [website](http://meme-suite.org/doc/install.html?man_type=web) [citation](https://git.biohpc.swmed.edu/BICF/Astrocyte/chipseq_analysis/blob/master/docs/references.md) + ChIPseeker [website](https://bioconductor.org/packages/release/bioc/html/ChIPseeker.html) [citation](https://git.biohpc.swmed.edu/BICF/Astrocyte/chipseq_analysis/blob/master/docs/references.md) + DiffBind [website](https://bioconductor.org/packages/release/bioc/html/DiffBind.html) [citation](https://git.biohpc.swmed.edu/BICF/Astrocyte/chipseq_analysis/blob/master/docs/references.md) + + MultiQC [website](https://multiqc.info/) [citation](https://git.biohpc.swmed.edu/BICF/Astrocyte/chipseq_analysis/blob/master/docs/references.md) + + BICFChip-seqAnalysisWorkflow [website](https://git.biohpc.swmed.edu/BICF/Astrocyte/chipseq_analysis) [citation](https://git.biohpc.swmed.edu/BICF/Astrocyte/chipseq_analysis/blob/master/docs/references.md) + + Nextflow [website](https://www.nextflow.io/) [citation](https://git.biohpc.swmed.edu/BICF/Astrocyte/chipseq_analysis/blob/master/docs/references.md) -- GitLab