From 8e0a5bd9e7bc033ab69dff05f3d24e4ff42cbd5b Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Tue, 12 Mar 2019 08:29:27 -0500
Subject: [PATCH] Add in software report generation.
---
workflow/main.nf | 2 +-
workflow/scripts/{software_report.py => generate_versions.py} | 0
2 files changed, 1 insertion(+), 1 deletion(-)
rename workflow/scripts/{software_report.py => generate_versions.py} (100%)
diff --git a/workflow/main.nf b/workflow/main.nf
index 513c4b5..55fd065 100644
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -501,7 +501,7 @@ process softwareReport {
script:
"""
- python3 $baseDir/scripts/software_report.py -o software_versions
+ python3 $baseDir/scripts/generate_versions.py -o software_versions
python3 $baseDir/scripts/generate_references.py -r $references -o software_references
"""
}
diff --git a/workflow/scripts/software_report.py b/workflow/scripts/generate_versions.py
similarity index 100%
rename from workflow/scripts/software_report.py
rename to workflow/scripts/generate_versions.py
--
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