From 8b35fceed2f2d35ea3671ec11d4bf8efad33b350 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Tue, 12 Mar 2019 08:00:52 -0500
Subject: [PATCH] Change overlap peaks back to original.
---
workflow/tests/test_annotate_peaks.py | 2 +-
workflow/tests/test_overlap_peaks.py | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/workflow/tests/test_annotate_peaks.py b/workflow/tests/test_annotate_peaks.py
index dcaacbe..1342a12 100644
--- a/workflow/tests/test_annotate_peaks.py
+++ b/workflow/tests/test_annotate_peaks.py
@@ -41,4 +41,4 @@ def test_upsetplot_pairedend():
def test_annotation_pairedend():
annotation_file = test_output_path + 'ENCSR729LGA.chipseeker_annotation.tsv'
assert os.path.exists(annotation_file)
- assert utils.count_lines(annotation_file) == 25834
+ assert utils.count_lines(annotation_file) == 25494
diff --git a/workflow/tests/test_overlap_peaks.py b/workflow/tests/test_overlap_peaks.py
index 28c8594..ff61c93 100644
--- a/workflow/tests/test_overlap_peaks.py
+++ b/workflow/tests/test_overlap_peaks.py
@@ -44,4 +44,4 @@ def test_overlap_peaks_singleend():
def test_overlap_peaks_pairedend():
assert os.path.exists(os.path.join(test_output_path, 'ENCSR729LGA.rejected.narrowPeak'))
peak_file = test_output_path + 'ENCSR729LGA.replicated.narrowPeak'
- assert utils.count_lines(peak_file) == 26100
+ assert utils.count_lines(peak_file) == 25758
--
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