diff --git a/workflow/tests/test_trim_reads.py b/workflow/tests/test_trim_reads.py index 953f15a3ea65719cdf73a76587cc35459de7397f..e01707687b244fc3e7bf1b1b7fbd53797a43afbf 100644 --- a/workflow/tests/test_trim_reads.py +++ b/workflow/tests/test_trim_reads.py @@ -12,7 +12,7 @@ test_output_path = os.path.dirname(os.path.abspath(__file__)) + \ @pytest.mark.singleend def test_trim_reads_singleend(): - raw_fastq = test_data_path + 'ENCLB144FDT/ENCFF833BLU.fastq.gz' + raw_fastq = test_data_path + 'ENCFF833BLU.fastq.gz' trimmed_fastq = test_output_path + 'ENCLB144FDT/ENCLB144FDT_R1_trimmed.fq.gz' assert os.path.getsize(raw_fastq) != os.path.getsize(trimmed_fastq) assert os.path.getsize(trimmed_fastq) == 2512853101 @@ -27,7 +27,7 @@ def test_trim_report_singleend(): @pytest.mark.pairedend def test_trim_reads_pairedend(): - raw_fastq = test_data_path + 'ENCLB637LZP/ENCFF582IOZ.fastq.gz' + raw_fastq = test_data_path + 'ENCFF582IOZ.fastq.gz' trimmed_fastq = test_output_path + 'ENCLB637LZP/ENCLB637LZP_R2_val_2.fq.gz' assert os.path.getsize(raw_fastq) != os.path.getsize(trimmed_fastq) assert os.path.getsize(trimmed_fastq) == 2229312710