diff --git a/workflow/tests/test_convert_reads.py b/workflow/tests/test_convert_reads.py
index 6be1f969c988b97c225684a83447824d3fb4e8c1..4ee7ee1c5d55318730b0886c24cfb8463f996f06 100644
--- a/workflow/tests/test_convert_reads.py
+++ b/workflow/tests/test_convert_reads.py
@@ -8,8 +8,8 @@ test_output_path = os.path.dirname(os.path.abspath(__file__)) + \
 
 
 def test_convert_reads_singleend():
-    assert os.path.exists(os.path.join(test_output_path, 'ENCFF646LXU.tagAlign.gz'))
-    assert os.path.exists(os.path.join(test_output_path, 'ENCFF646LXU.bedse.gz'))
+    assert os.path.exists(os.path.join(test_output_path, 'ENCFF646LXU.filt.nodup.tagAlign.gz'))
+    assert os.path.exists(os.path.join(test_output_path, 'ENCFF646LXU.filt.nodup.bedse.gz'))
 
 
 def test_map_qc_pairedend():