From 75f9f641387ec62f8fdc8a37eebfd19c89197c50 Mon Sep 17 00:00:00 2001
From: Jeremy Mathews <Jeremy.Mathews@utsouthwestern.edu>
Date: Tue, 16 Jul 2019 08:52:26 -0500
Subject: [PATCH] update argv arguments
---
workflow/tests/test_pool_and_psuedoreplicate.py | 3 +--
1 file changed, 1 insertion(+), 2 deletions(-)
diff --git a/workflow/tests/test_pool_and_psuedoreplicate.py b/workflow/tests/test_pool_and_psuedoreplicate.py
index 220ffbd..38db785 100644
--- a/workflow/tests/test_pool_and_psuedoreplicate.py
+++ b/workflow/tests/test_pool_and_psuedoreplicate.py
@@ -63,9 +63,8 @@ def test_check_controls_single(design_experiment_3):
@pytest.mark.unit
def test_single_rep(design_experiment_2):
- sys.argv.extend(['--design', 'design_experiment_2'])
+ sys.argv.extend(['--design', design_experiment_2])
sys.argv.extend(['--paired', 'true'])
- sys.argv.extend(['--cutoff', '1.2'])
single_rep = pool_and_psuedoreplicate.main()
--
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