diff --git a/workflow/tests/test_pool_and_psuedoreplicate.py b/workflow/tests/test_pool_and_psuedoreplicate.py index 220ffbd9e691b2b1c775a23f2cad27780ed6e1be..38db785c5c92a09e09c3c2e2920217ea8ba6d104 100644 --- a/workflow/tests/test_pool_and_psuedoreplicate.py +++ b/workflow/tests/test_pool_and_psuedoreplicate.py @@ -63,9 +63,8 @@ def test_check_controls_single(design_experiment_3): @pytest.mark.unit def test_single_rep(design_experiment_2): - sys.argv.extend(['--design', 'design_experiment_2']) + sys.argv.extend(['--design', design_experiment_2]) sys.argv.extend(['--paired', 'true']) - sys.argv.extend(['--cutoff', '1.2']) single_rep = pool_and_psuedoreplicate.main()