From 50cc95e73cf34f125f7fc1c9f09a988bfe84133b Mon Sep 17 00:00:00 2001
From: Jeremy Mathews <Jeremy.Mathews@utsouthwestern.edu>
Date: Tue, 16 Jul 2019 08:16:04 -0500
Subject: [PATCH] push arg parser

---
 workflow/tests/test_pool_and_psuedoreplicate.py | 5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

diff --git a/workflow/tests/test_pool_and_psuedoreplicate.py b/workflow/tests/test_pool_and_psuedoreplicate.py
index c641086..7bb26c3 100644
--- a/workflow/tests/test_pool_and_psuedoreplicate.py
+++ b/workflow/tests/test_pool_and_psuedoreplicate.py
@@ -62,7 +62,10 @@ def test_check_controls_single(design_experiment_3):
 
 @pytest.mark.unit
 def test_single_rep(design_experiment_2):
-    single_rep = pool_and_psuedoreplicate.main(['true', design_experiment_2, 1.2])
+    sys.argv.extend(['-d', design_experiment_2])
+    sys.argv.extend(['-p', true])
+    sys.argv.extend(['-c', 1.2])
+    single_rep = pool_and_psuedoreplicate.main()
 
 
 @pytest.mark.singleend
-- 
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