diff --git a/workflow/tests/test_xcor.py b/workflow/tests/test_xcor.py index f5723ed1c7b51c3a1fc16342e5ad676515926752..b0eafa368e34c27ef095ddd0c5997bf1a13fab79 100644 --- a/workflow/tests/test_xcor.py +++ b/workflow/tests/test_xcor.py @@ -10,7 +10,8 @@ test_output_path = os.path.dirname(os.path.abspath(__file__)) + \ def test_convert_reads_singleend(): assert os.path.exists(os.path.join(test_output_path, 'ENCFF833BLU.filt.nodup.tagAlign.15.tagAlign.gz.cc.plot.pdf')) - df_xcor = pd.read_csv("ENCFF833BLU.filt.nodup.tagAlign.15.tagAlign.gz.cc.qc", sep="\t", header=None) + qc_file = os.path.join(test_output_path,"ENCFF833BLU.filt.nodup.tagAlign.15.tagAlign.gz.cc.qc") + df_xcor = pd.read_csv(qc_file, sep="\t", header=None) assert df_xcor[2].iloc[0] == '195,215,230' assert df_xcor[8].iloc[0] == 1.024836 assert df_xcor[9].iloc[0] == 1.266678