From 1dd9f5e45e91204e078a82f6f53848665f6d478b Mon Sep 17 00:00:00 2001
From: Jeremy Mathews <Jeremy.Mathews@utsouthwestern.edu>
Date: Wed, 24 Jul 2019 15:39:41 -0500
Subject: [PATCH] update reference genome to gtf
---
workflow/main.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/main.nf b/workflow/main.nf
index e239d40..da287e8 100644
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -47,7 +47,7 @@ if (params.astrocyte) {
params.genomeSize = params.genome ? params.genomes[ params.genome ].genomesize ?: false : false
params.chromSizes = params.genome ? params.genomes[ params.genome ].chromsizes ?: false : false
params.fasta = params.genome ? params.genomes[ params.genome ].fasta ?: false : false
- params.gtf = params.genome ? params.genomes[ params.genome ].fasta ?: false : false
+ params.gtf = params.genome ? params.genomes[ params.genome ].gtf ?: false : false
}
--
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