Commits · f513e97af4938440968482e11d0f6989f305f47d · BICF / Astrocyte / cellranger_mkfastq

17 May, 2019 2 commits
- Test Folder Check with file rename and directory exit · f513e97a
  Jeremy Mathews authored May 17, 2019
  
  f513e97a
- Collapse Folder and File Names · ea391ce2
  Jeremy Mathews authored May 17, 2019
  
  ea391ce2
27 Apr, 2019 22 commits
- Update .gitlab-ci.yml · 7aa16d3d
  Gervaise Henry authored Apr 27, 2019
  
  7aa16d3d
- Update .gitlab-ci.yml · f2e5ddd5
  Gervaise Henry authored Apr 27, 2019
  
  f2e5ddd5
- Update .gitlab-ci.yml · bd871022
  Gervaise Henry authored Apr 27, 2019
  
  bd871022
- Update .gitlab-ci.yml · 49a5fdff
  Gervaise Henry authored Apr 27, 2019
  
  49a5fdff
- Merge branch 'revert-4b0bff5a' into 'develop' · 7d023045
  Gervaise Henry authored Apr 27, 2019
```
Revert "Update .gitlab-ci.yml"

See merge request !30
```
  7d023045
- Revert "Update .gitlab-ci.yml" · 967c8509
  Gervaise Henry authored Apr 27, 2019
```
This reverts commit 4b0bff5a
```
  967c8509
- Update .gitlab-ci.yml · 4b0bff5a
  Gervaise Henry authored Apr 27, 2019
  
  4b0bff5a
- Update .gitlab-ci.yml · f1b234cf
  Gervaise Henry authored Apr 27, 2019
  
  f1b234cf
- Add artifacts expiration in CI · 8bf1298e
  Gervaise Henry authored Apr 27, 2019
  
  8bf1298e
- Update index.md · 0d93e020
  Gervaise Henry authored Apr 27, 2019
  
  0d93e020
- Merge branch '16-astrocyte.input.regex.path' into 'develop' · 210b3971
  Gervaise Henry authored Apr 27, 2019
```
Astrocyte regex for files limit filenames

Closes #16

See merge request !29
```
  210b3971
- Astrocyte regex for files limit filenames · 22d9971c
  Gervaise Henry authored Apr 27, 2019
  
  22d9971c
- Merge branch '17-link.changelog.to.astrocyte.docs' into 'develop' · 9fedc031
  Gervaise Henry authored Apr 27, 2019
```
Resolve "Link changelog to index.md"

Closes #17

See merge request !28
```
  9fedc031
- Merge branch 'revert-6a95b60c' into 'develop' · 6ce6cdcc
  Gervaise Henry authored Apr 27, 2019
```
Revert "Update README.md"

See merge request !27
```
  6ce6cdcc
- Update README.md · 9b5d026d
  Gervaise Henry authored Apr 27, 2019
  
  9b5d026d
- Revert "Update README.md" · 2e5d6274
  Gervaise Henry authored Apr 27, 2019
```
This reverts commit 6a95b60c
```
  2e5d6274
- Update README.md · 6a95b60c
  Gervaise Henry authored Apr 27, 2019
  
  6a95b60c
- Update CHANGELOG.md · 4d89c416
  Gervaise Henry authored Apr 27, 2019
  
  4d89c416
- Update index.md · e33a5aa0
  Gervaise Henry authored Apr 27, 2019
  
  e33a5aa0
- Merge branch '20-ci.tag.min.test' into 'develop' · 5e6da487
  Gervaise Henry authored Apr 27, 2019
```
Don't run 1FC test with tag

Closes #20

See merge request !26
```
  5e6da487
- Don't run 1FC test with tag · f8f9a943
  Gervaise Henry authored Apr 27, 2019
  
  f8f9a943
- Update CHANGELOG.md · 5a9e99b1
  Gervaise Henry authored Apr 27, 2019
  
  5a9e99b1
26 Apr, 2019 15 commits
- Merge branch '18-doi' into 'develop' · 947db3d3
  Gervaise Henry authored Apr 26, 2019
```
Add DOI to readme

Closes #18

See merge request !25
```
  947db3d3
- Add DOI to readme · 15e1d254
  Venkat Malladi authored Apr 26, 2019
  
  15e1d254
- Update CHANGELOG.md · 8d02cf38
  Gervaise Henry authored Apr 26, 2019
  
  8d02cf38
- Update CHANGELOG.md · 72d9ac49
  Gervaise Henry authored Apr 26, 2019
  
  72d9ac49
- Update CHANGELOG.md · a5d59d60
  Gervaise Henry authored Apr 26, 2019
  
  a5d59d60
- Prevent error for ln test files if already exists · 63660318
  Gervaise Henry authored Apr 26, 2019
  
  63660318
- Correct mkdir in CI · c33b5387
  Gervaise Henry authored Apr 26, 2019
  
  c33b5387
- Prevent error if mkdir in CI discovers folder already exists · 0c933402
  Gervaise Henry authored Apr 26, 2019
  
  0c933402
- Add quotes around paths in case of spaces · b7f26684
  Gervaise Henry authored Apr 26, 2019
  
  b7f26684
- Update CHANGELOG.md · da0674c2
  Gervaise Henry authored Apr 26, 2019
```
Deleted CHANGELOG
```
  da0674c2
- Add CHANGELOG · e0526cc1
  Gervaise Henry authored Apr 26, 2019
  
  e0526cc1
- Add quotes to param submission in CI · 98ef5553
  Gervaise Henry authored Apr 26, 2019
  
  98ef5553
- Add 2FC test to CI · 49a198fe
  Gervaise Henry authored Apr 26, 2019
  
  49a198fe
- Merge branch '13-add.flowcell.to.outputs' into 'develop' · 0204dcb2
  Gervaise Henry authored Apr 26, 2019
```
Resolve "Handle multi-flowcells in fastqc and multiqc"

Closes #13

See merge request !18
```
  0204dcb2
- Report fastqc's from multiple flowcells separate · 3f1278c8
  Gervaise Henry authored Apr 26, 2019
  
  3f1278c8
25 Apr, 2019 1 commit
- Split version file gen to separate process, run single version/multiqc process · d5ba8a06
  Gervaise Henry authored Apr 25, 2019
  
  d5ba8a06