From da54554ddb43e23eefe2e9dcdce5dbe7ce52f4c3 Mon Sep 17 00:00:00 2001 From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu> Date: Fri, 27 Dec 2019 01:09:40 -0600 Subject: [PATCH] Update biohpc.config --- workflow/conf/biohpc.config | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/workflow/conf/biohpc.config b/workflow/conf/biohpc.config index 5176b0b..46b8d20 100755 --- a/workflow/conf/biohpc.config +++ b/workflow/conf/biohpc.config @@ -2,13 +2,13 @@ process { executor = 'slurm' queue = 'super' clusterOptions = '--hold' + container = 'docker://bicf/bicfbase:1.3' withName:checkDesignFile { container = 'docker://bicf/python3:1.2' executor = 'local' } withName:untarBCL { - container = 'docker://bicf/bicfbase:1.3' queue = 'super' } withName:mkfastq { @@ -16,7 +16,6 @@ process { queue = '128GB,256GB,256GBv1,384GB' } withName:countDesign { - container = 'docker://bicf/bicfbase:1.3' executor = 'local' } withName:fastqc { -- GitLab