diff --git a/workflow/conf/biohpc.config b/workflow/conf/biohpc.config index 5176b0b74478622d497c1688dcf38d65cff1a425..46b8d20ff3a9101424b8de94a0558cf5f7b0492e 100755 --- a/workflow/conf/biohpc.config +++ b/workflow/conf/biohpc.config @@ -2,13 +2,13 @@ process { executor = 'slurm' queue = 'super' clusterOptions = '--hold' + container = 'docker://bicf/bicfbase:1.3' withName:checkDesignFile { container = 'docker://bicf/python3:1.2' executor = 'local' } withName:untarBCL { - container = 'docker://bicf/bicfbase:1.3' queue = 'super' } withName:mkfastq { @@ -16,7 +16,6 @@ process { queue = '128GB,256GB,256GBv1,384GB' } withName:countDesign { - container = 'docker://bicf/bicfbase:1.3' executor = 'local' } withName:fastqc {