diff --git a/CHANGELOG.md b/CHANGELOG.md index b4c48ac060a1ddb8854f4a7f93312b6dd561e2c8..b440f274f78504684c858de780fc0a655b187981 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,4 +1,19 @@ -# v1.3.1 (in development) +# v1.4.0 (in development) +**UserFacing** +* Check Design File for spaces in name and file contents +* Update design example, README, and astrocyte.yml with current barcode IDs + +**Background** +* Add Nextflow Tower integration into CI (GHH's profile) + +*Known Bugs* +* cellranger mkfastq will not accept spaces in path for run param even if quoted, issue raised on 10XGenomics/cellranger github issue [#31](https://github.com/10XGenomics/cellranger/issues/31) + * note: 10x doesn't check github issues, emailed instead + * note: pipeline checks for spaces and exits prematurely if found +* If multiple flowcells (tar'd) files are inputted then there will be multiple fastq's by the same name, currently dealing with that name conflict is not tractable + * note: if multiple bcl files are detected then cellranger_count design file is not created + +# v1.3.1 **User Facing** * Change Cellranger Version to 3.1.0 * Fix countDesign to take multiple samples