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BICF
Astrocyte
cellranger_mkfastq
Commits
80ae9913
Commit
80ae9913
authored
Nov 03, 2020
by
Gervaise Henry
🤠
Browse files
Remove indev
parent
fd49a776
Pipeline
#8276
passed with stages
in 7 minutes and 39 seconds
Changes
3
Pipelines
1
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CHANGELOG.md
View file @
80ae9913
# v2.2.0
-indev
# v2.2.0
**UserFacing**
*
Update cellranger to version 4.0.0
...
...
workflow/main.nf
View file @
80ae9913
...
...
@@ -32,7 +32,7 @@ bclCount = Channel
.count()
// Define regular variables
pipelineVersion = "2.2.0
-indev
"
pipelineVersion = "2.2.0"
name = params.name
designLocation = Channel
.fromPath(params.designFile)
...
...
workflow/nextflow.config
View file @
80ae9913
...
...
@@ -48,6 +48,6 @@ manifest {
homePage
=
'https://git.biohpc.swmed.edu/BICF/Astrocyte/cellranger_mkfastq'
description
=
'This pipeline is a wrapper for the cellranger mkfastq tool from 10x Genomics (which uses Illuminas bcl2fastq). It takes bcls and demultiplexes samples from 10x Genomics Single Cell Gene Expression libraries into fastqs.'
mainScript
=
'main.nf'
version
=
'2.2.0
-indev
'
version
=
'2.2.0'
nextflowVersion
=
'>=0.31.0'
}
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