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BICF
Astrocyte
cellranger_mkfastq
Commits
6f038019
Commit
6f038019
authored
Jun 20, 2020
by
Gervaise Henry
🤠
Browse files
Set version to 2.1.0
parent
fc4f6694
Pipeline
#7353
passed with stages
in 11 minutes and 53 seconds
Changes
3
Pipelines
1
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CHANGELOG.md
View file @
6f038019
# v2.
x.x-indev
# v2.
1.0
**UserFacing**
*
Check Design File for spaces in name and file contents
*
Update design example, README, and astrocyte.yml with current barcode IDs
...
...
workflow/main.nf
View file @
6f038019
...
...
@@ -24,7 +24,7 @@ bclCount = Channel
.count()
// Define regular variables
pipelineVersion = "2.
x.x-indev
"
pipelineVersion = "2.
1.0
"
name = params.name
designLocation = Channel
.fromPath(params.designFile)
...
...
workflow/nextflow.config
View file @
6f038019
...
...
@@ -47,6 +47,6 @@ manifest {
homePage
=
'https://git.biohpc.swmed.edu/BICF/Astrocyte/cellranger_mkfastq'
description
=
'This pipeline is a wrapper for the cellranger mkfastq tool from 10x Genomics (which uses Illuminas bcl2fastq). It takes bcls and demultiplexes samples from 10x Genomics Single Cell Gene Expression libraries into fastqs.'
mainScript
=
'main.nf'
version
=
'2.
0
.0
-indev
'
version
=
'2.
1
.0'
nextflowVersion
=
'>=0.31.0'
}
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