Commit 5a111ac2 authored by Gervaise Henry's avatar Gervaise Henry 🤠
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Update CHANGELOG.md

parent 42ddd6e9
Pipeline #4303 passed with stages
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...@@ -2,6 +2,7 @@ ...@@ -2,6 +2,7 @@
**User Facing** **User Facing**
* Add references to of tools to mutiQC report * Add references to of tools to mutiQC report
* Add BICF details to multiqc report * Add BICF details to multiqc report
* Create cellranger_count design file (if only 1 flowcell is inputted)
**Background** **Background**
* Add DOI (develop branch) * Add DOI (develop branch)
...@@ -13,8 +14,10 @@ ...@@ -13,8 +14,10 @@
*Known Bugs* *Known Bugs*
* cellranger mkfastq will not accept spaces in path for run param even if quoted, issue raised on 10XGenomics/cellranger github issue [#31](https://github.com/10XGenomics/cellranger/issues/31) * cellranger mkfastq will not accept spaces in path for run param even if quoted, issue raised on 10XGenomics/cellranger github issue [#31](https://github.com/10XGenomics/cellranger/issues/31)
note: 10x doesn't check github issues, emailed instead * note: 10x doesn't check github issues, emailed instead
note: pipeline checks for spaces and exits prematurely if found * note: pipeline checks for spaces and exits prematurely if found
* If multiple flowcells (tar'd) files are inputted then there will be multiple fastq's by the same name, currently dealing with that name conflict is not tractable
* note: if multiple bcl files are detected then cellranger_count design file is not created
# v1.1.4 # v1.1.4
**User Facing** **User Facing**
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