Update configs

workflow/configs/aws.config

@@ -16,7 +16,11 @@ process {
   withName:checkDesignFile {
     cpus = 4
   }
-  withName:mkfastq {
+  withName:cellranger_mkfastq {
+    cpus = 6
+    memory = '2 GB'
+  }
+  withName:spaceranger_mkfastq {
     cpus = 6
     memory = '2 GB'
   }

workflow/configs/cluster.config

@@ -12,11 +12,11 @@ process {
   withName:untarBCL {
     queue = 'super'
   }
-  withName:mkfastq {
+  withName:cellranger_mkfastq {
     queue = '128GB,256GB,256GBv1,384GB'
   }
-  withName:countDesign {
-    executor = 'local'
+  withName:spaceranger_mkfastq {
+    queue = '128GB,256GB,256GBv1,384GB'
   }
   withName:fastqc {
     queue = 'super'

workflow/configs/multiqc_config.yaml

@@ -5,12 +5,12 @@ custom_logo_title: 'Bioinformatics Core Facility'
 
 report_header_info:
     - Contact E-mail: 'bicf@utsouthwestern.edu'
-    - Application Type: 'cellranger_mkfastq'
+    - Application Type: '10x-ranger_mkfastq'
     - Department: 'Bioinformatic Core Facility, Department of Bioinformatics'
 
 
 # Title to use for the report.
-title: BICF CellRanger MKfastq Analysis Report
+title: BICF 10x-Ranger MKfastq Analysis Report
 
 report_comment: >
   This report has been generated by the <a href="https://git.biohpc.swmed.edu/BICF/Astrocyte/cellranger_mkfastq"