Commit 54fc41b2 authored by Jeremy Mathews's avatar Jeremy Mathews

Update configs

parent 7bb5c7ab
Pipeline #8283 failed with stages
in 12 seconds
......@@ -16,7 +16,11 @@ process {
withName:checkDesignFile {
cpus = 4
}
withName:mkfastq {
withName:cellranger_mkfastq {
cpus = 6
memory = '2 GB'
}
withName:spaceranger_mkfastq {
cpus = 6
memory = '2 GB'
}
......
......@@ -12,11 +12,11 @@ process {
withName:untarBCL {
queue = 'super'
}
withName:mkfastq {
withName:cellranger_mkfastq {
queue = '128GB,256GB,256GBv1,384GB'
}
withName:countDesign {
executor = 'local'
withName:spaceranger_mkfastq {
queue = '128GB,256GB,256GBv1,384GB'
}
withName:fastqc {
queue = 'super'
......
......@@ -5,12 +5,12 @@ custom_logo_title: 'Bioinformatics Core Facility'
report_header_info:
- Contact E-mail: 'bicf@utsouthwestern.edu'
- Application Type: 'cellranger_mkfastq'
- Application Type: '10x-ranger_mkfastq'
- Department: 'Bioinformatic Core Facility, Department of Bioinformatics'
# Title to use for the report.
title: BICF CellRanger MKfastq Analysis Report
title: BICF 10x-Ranger MKfastq Analysis Report
report_comment: >
This report has been generated by the <a href="https://git.biohpc.swmed.edu/BICF/Astrocyte/cellranger_mkfastq"
......
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment