diff --git a/workflow/main.nf b/workflow/main.nf index bf58849f8318776221df9cd2381fca9fd80506ce..f9ae940d876fc485c3d3cd574be03659ebef5e5a 100755 --- a/workflow/main.nf +++ b/workflow/main.nf @@ -91,7 +91,6 @@ process mkfastq { file("**/outs/**/*.fastq.gz") into fastqPaths file("**/outs/**/*.fastq.gz") into cellrangerCount file("**/outs/fastq_path/Stats/*") into bqcPaths - file("**/outs/fastq_path/Reports/*") into fqcPaths2 val "${bcl.baseName}" into bclName script: