diff --git a/.gitignore b/.gitignore index 787e88f5b122ba76ae6157ed3687128da42244b0..8b4b1eadf6253fc94cefe75b485a051ed8f3d71e 100644 --- a/.gitignore +++ b/.gitignore @@ -311,6 +311,7 @@ timeline*.html* *~ *.tmp +*.swp *.out run*.sh diff --git a/workflow/scripts/.multiqc_config.yaml b/workflow/scripts/.multiqc_config.yaml index c33d1c24cd9f4a281b6105414b7c481ba2d881eb..8efcacfccaffc43334d5d3e82bf1bd9801ff521b 100644 --- a/workflow/scripts/.multiqc_config.yaml +++ b/workflow/scripts/.multiqc_config.yaml @@ -18,4 +18,4 @@ module_order: target: '' path_filters: - '*_R2_*fastqc.zip' - - 'Software Versions' + - custom_content diff --git a/workflow/scripts/generate_versions.py b/workflow/scripts/generate_versions.py index f61017ba86f7fa639c6dca3e3f54f58ae10b0331..e526843627834134765a186cc93b3b8eccded316 100644 --- a/workflow/scripts/generate_versions.py +++ b/workflow/scripts/generate_versions.py @@ -91,7 +91,7 @@ def main(): # Dump to YAML print( ''' - id: 'Software Versions' + id: 'software_versions' section_name: 'Software Versions' section_href: 'https://git.biohpc.swmed.edu/BICF/Astrocyte/cellranger_mkfastq/' plot_type: 'html'