Commit 25c7c97e authored by Gervaise Henry's avatar Gervaise Henry 🤠
Browse files

Add nextflow version and manual pipeline version to multiqc output

parent 661cb8de
Pipeline #7322 failed with stages
in 6 minutes and 39 seconds
......@@ -60,8 +60,8 @@ process checkDesignFile {
output:
file("design.checked.csv") into designPaths
file("design.checked.csv") into designCount
//file("version_pipeline.txt") into version_pipeline
//file("version_nextflow.txt") into version_nextflow
file("version_pipeline.txt") into version_pipeline
file("version_nextflow.txt") into version_nextflow
file("version_python.txt") into version_python
script:
......@@ -75,9 +75,14 @@ process checkDesignFile {
fi
python3 check_design.py -d \${noSpaceDesign}
bash versions_python.sh > version_python.txt
echo "${workflow.nextflow.version}" > version_nextflow.txt
echo "2.x.x-indev" > version_pipeline.txt
"""
}
/* nextflow workflow manifest version calls that aren't compatible with Asrcocyte
echo "${workflow.manifest.version}" > version_pipeline.txt
*/
process untarBCL {
......@@ -201,8 +206,8 @@ process versions {
input:
file versionsScript
file referencesScript
//file version_pipeline
//file version_nextflow
file version_pipeline
file version_nextflow
file version_python
file version_pigz
file version_cellranger
......
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