From e62bf327bc03f086e68072fac296e1a7967f591c Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Fri, 14 Aug 2020 13:28:35 -0500
Subject: [PATCH] Try sfn for seurat test data
---
.gitlab-ci.yml | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index f72ef6a..27d3b6d 100755
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -140,7 +140,7 @@ module_seurat_test:
- tags
script:
- module load seurat/3.0.0
- - ln -s test-data/output/* .
+ - ln -sfn test_data/output/* .
- seurat-Rscript workflow/scripts/downstream_viz.r --sample sample1 --cellrangerVersion 4.0.0
- bash workflow/scripts/versions_seurat.sh > version_seurat.txt
artifacts:
--
GitLab