diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 03a422fc78ecb76ac0bae7962cda596acec7e15b..29ac9005a4cd9640463a52841aec7e999cf8ac0e 100755
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -2,7 +2,7 @@ before_script:
   - module load astrocyte
   - module load python/3.6.1-2-anaconda
   - pip install --user pytest-pythonpath==0.7.1 pytest-cov==2.5.1
-  - module load nextflow/0.31.1_Ignite
+  - module load nextflow/19.09.0
   - mkdir test_data/hu.v3s1r500
   - mkdir test_data/mu.v3s1r500
   - mkdir test_data/hu.v3s2r10k
@@ -40,7 +40,7 @@ simple_1:
       - develop
       - master
   script:
-  - nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/hu.v3s1r500/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/hu.v3s1r500/design.csv" --genome 'GRCh38-3.0.0' --kitVersion 'three' --version '3.1.0'
+  - nextflow run workflow/main.nf --fastq "test_data/hu.v3s1r500/*.fastq.gz" --designFile "test_data/hu.v3s1r500/design.csv" --genome 'GRCh38-3.0.0' --kitVersion 'three' --version '3.1.0' -with-tower
   - pytest -m count310
   artifacts:
     name: "$CI_JOB_NAME"
@@ -65,7 +65,7 @@ simple_2:
       - master
       - tags
   script:
-  - nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/mu.v3s1r500/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/mu.v3s1r500/design.csv" --genome 'mm10-3.0.0' --kitVersion 'three' --version '3.1.0'
+  - nextflow run workflow/main.nf --fastq "test_data/mu.v3s1r500/*.fastq.gz" --designFile "test_data/mu.v3s1r500/design.csv" --genome 'mm10-3.0.0' --kitVersion 'three' --version '3.1.0' -with-tower
   - pytest -m count310
   artifacts:
     name: "$CI_JOB_NAME"
@@ -89,7 +89,7 @@ detailed_1:
     refs:
       - tags
   script:
-  - nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/hu.v3s2r10k/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/hu.v3s2r10k/design.csv" --genome 'GRCh38-3.0.0' --kitVersion 'auto' --version '3.1.0'
+  - nextflow run workflow/main.nf --fastq "test_data/hu.v3s2r10k/*.fastq.gz" --designFile "test_data/hu.v3s2r10k/design.csv" --genome 'GRCh38-3.0.0' --kitVersion 'auto' --version '3.1.0' -with-tower
   - pytest -m count310
   artifacts:
     name: "$CI_JOB_NAME"
@@ -114,7 +114,7 @@ detailed_2:
     refs:
       - tags
   script:
-  - nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/hu.v3s2r10k/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/hu.v3s2r10k/design.csv" --genome 'GRCh38-3.0.0' --kitVersion 'auto' --version '3.0.2'
+  - nextflow run workflow/main.nf --fastq "test_data/hu.v3s2r10k/*.fastq.gz" --designFile "test_data/hu.v3s2r10k/design.csv" --genome 'GRCh38-3.0.0' --kitVersion 'auto' --version '3.0.2' -with-tower
   - pytest -m count302
   artifacts:
     name: "$CI_JOB_NAME"
@@ -138,7 +138,7 @@ detailed_3:
     refs:
       - tags
   script:
-  - nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/mu.v3s2r10k/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/mu.v3s2r10k/design.csv" --genome 'mm10-3.0.0' --kitVersion 'three' --version '3.0.1'
+  - nextflow run workflow/main.nf --fastq "test_data/mu.v3s2r10k/*.fastq.gz" --designFile "test_data/mu.v3s2r10k/design.csv" --genome 'mm10-3.0.0' --kitVersion 'three' --version '3.0.1' -with-tower
   - pytest -m count301
   artifacts:
     name: "$CI_JOB_NAME"
@@ -162,7 +162,7 @@ detailed_4:
     refs:
       - tags
   script:
-  - nextflow run workflow/main.nf --fastq "$CI_PROJECT_DIR/test_data/hu.v2s2r10k/*.fastq.gz" --designFile "$CI_PROJECT_DIR/test_data/hu.v2s2r10k/design.csv" --genome 'GRCh38-1.2.0' --kitVersion 'two' --version '2.1.1'
+  - nextflow run workflow/main.nf --fastq "test_data/hu.v2s2r10k/*.fastq.gz" --designFile "test_data/hu.v2s2r10k/design.csv" --genome 'GRCh38-1.2.0' --kitVersion 'two' --version '2.1.1' -with-tower
   - pytest -m count211
   artifacts:
     name: "$CI_JOB_NAME"
diff --git a/CHANGELOG.md b/CHANGELOG.md
index df4bdebb1180a5eb2ed19928d12262bf84bd551e..599997e647ecb00d1b6466b7215cac19435d0419 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,3 +1,11 @@
+# v1.3.0 (in development)
+**User Facing**
+
+**Background**
+* Add Nextflow Tower integration into CI (GHH's profile)
+
+*Known Bugs*
+
 # v1.2.0
 **User Facing**
 * Add Cellranger Version 3.1.0