From b7c95b7370dacf2040e877436b47db4390bcf5bd Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Wed, 5 Sep 2018 11:39:27 -0500
Subject: [PATCH] Update main.nf

---
 workflow/main.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/workflow/main.nf b/workflow/main.nf
index 99f81a3..ae4f6eb 100755
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -8,7 +8,7 @@ params.fastq = "$baseDir/../test_data/*.fastq.gz"
 params.designFile = "$baseDir/../test_data/design.csv"
 params.genome = 'GRCh38'
 params.genomes = []
-params.refIndex = params.genome ? params.genomes[ params.genome ].ref ?: false : false
+params.refIndex = params.genomes[ params.genome ].ref
 params.expectCells = 10000
 params.forceCells = 0
 
-- 
GitLab