From b131fbede8dcf59f1d3b94b5281acc1dd5c43842 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Mon, 4 Mar 2019 20:37:24 -0600
Subject: [PATCH] Add reference version 3.0.0 to address #9
---
astrocyte_pkg.yml | 12 ++++++++----
1 file changed, 8 insertions(+), 4 deletions(-)
diff --git a/astrocyte_pkg.yml b/astrocyte_pkg.yml
index 492039e..0966635 100755
--- a/astrocyte_pkg.yml
+++ b/astrocyte_pkg.yml
@@ -97,10 +97,14 @@ workflow_parameters:
- id: genome
type: select
choices:
- - [ '/project/apps_database/cellranger/refdata-cellranger-GRCh38-1.2.0', 'Human GRCh38']
- - [ '/project/apps_database/cellranger/refdata-cellranger-hg19-1.2.0', 'Human GRCh37 (hg19)']
- - [ '/project/apps_database/cellranger/refdata-cellranger-mm10-1.2.0', 'Mouse GRCm38 (mm10)']
- - [ '/project/apps_database/cellranger/refdata-cellranger-hg19_and_mm10-1.2.0', 'Human GRCh37 (hg19) + Mouse GRCm38 (mm19)']
+ - [ '/project/apps_database/cellranger/refdata-cellranger-GRCh38-3.0.0', 'Human GRCh38 release 93']
+ - [ '/project/apps_database/cellranger/refdata-cellranger-GRCh38-1.2.0', 'Human GRCh38 release 84']
+ - [ '/project/apps_database/cellranger/refdata-cellranger-hg19-3.0.0', 'Human GRCh37 (hg19) release 87']
+ - [ '/project/apps_database/cellranger/refdata-cellranger-hg19-1.2.0', 'Human GRCh37 (hg19) release 84']
+ - [ '/project/apps_database/cellranger/refdata-cellranger-mm10-3.0.0', 'Mouse GRCm38 (mm10) release 93']
+ - [ '/project/apps_database/cellranger/refdata-cellranger-mm10-1.2.0', 'Mouse GRCm38 (mm10) release 84']
+ - [ '/project/apps_database/cellranger/refdata-cellranger-hg19_and_mm10-3.0.0', 'Human GRCh37 (hg19) + Mouse GRCm38 (mm19) release 93']
+ - [ '/project/apps_database/cellranger/refdata-cellranger-hg19_and_mm10-1.2.0', 'Human GRCh37 (hg19) + Mouse GRCm38 (mm19) release 84']
- [ '/project/apps_database/cellranger/refdata-cellranger-ercc92-1.2.0', 'ERCC.92 Spike-In']
required: true
description: |
--
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