diff --git a/CHANGELOG.md b/CHANGELOG.md
index 7136316e6398ccad40cbc55bd50641d7170e5c30..21a8238117bd5f52b41dd0b4a080e585020f51d9 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,20 +1,17 @@
-# v2.0.4
+# v2.1.0
 **User Facing**
 * Check Design File for spaces in name and file contents
-* Attempt to preven thredding error (which appears to only happen on 256GBv1 nodes)
+* Attempt to prevent thredding error (which appears to only happen on 256GBv1 nodes)
 * Add option for 5' GEX chemistry
 * Remove cellranger 3.0.1 as an option
-* Add cellranger 2.2.0 as an option
 * Fix CLI MultiQC failure bug
 
 **Background**
 * Add Nextflow Tower integration into CI (GHH's profile)
 * Add new layered config folders, including prepare for awsifying
 * Update param to new standard
-* Use docker containers
 * Update CI
 * Add pipeline tracking tool
-* Add singularity to astrocyte workflow_modules
 
 *Known Bugs*
 * Vizapp does not yet work for Astrocyte
diff --git a/README.md b/README.md
index 1edd5a8db23b710ef8e58fc406ae15592295df6d..ae33423a4719c29a91cb99d08fdf0dccd46308b0 100755
--- a/README.md
+++ b/README.md
@@ -21,7 +21,10 @@ Additionally, the pipeline is designed to work with Astrocyte Workflow System us
 
 Cloud Compatibility
 -------------------
-This pipeline is also capable of being run on AWS. To do so:
+This pipeline is also capable of being run on AWS.
+**NOTE: This pipeline has been reverted to a non-containerized version to work on Astrocyte. Tag `containerized` for the last working containerized version which will be compatible with AWS.**
+
+To do so:
 * Build a AWS batch queue and environment either manually or with [aws-cloudformantion](https://console.aws.amazon.com/cloudformation/home?#/stacks/new?stackName=Nextflow&templateURL=https://s3.amazonaws.com/aws-genomics-workflows/templates/nextflow/nextflow-aio.template.yaml)
 * Edit one of the aws configs in workflow/config/
   * Replace workDir with the S3 bucket generated
@@ -35,6 +38,10 @@ To Run:
 -------
 
 * Available parameters:
+  * **-profile**
+    * what environments to run on, available: `biohpc`, `local`, `cluster`, `aws`, `ondemand`, `spot`
+    * eg: **-profile biohpc,cluster** to run on BioHPC in cluster mode
+    * eg: **-profile aws,ondemand** to run on AWS on a on-demand queue
   * **--fastq**
     * path to the fastq location
     * R1 and R2 only necessary but can include I2
@@ -95,11 +102,10 @@ To Run:
     * eg: **--kitVersion '3GEXv3'**
   * **--version**
     * cellranger version
-    * --version (cellranger version) 2.1.1 and 2.2.0 can only read --kitVersion of 3GEXv2
+    * --version (cellranger version) 2.1.1 can only read --kitVersion of 3GEXv2
     * options:
         * *'3.1.0'*
         * *'3.0.2'*
-        * *'2.2.0'*
         * *'2.1.1'*
     * eg: **--version '3.1.0'**
   * **--outDir**
@@ -107,7 +113,7 @@ To Run:
     * eg: **--outDir 'test'**
 * FULL EXAMPLE:
   ```
-  nextflow run workflow/main.nf --fastq '/project/shared/bicf_workflow_ref/workflow_testdata/cellranger/cellranger_count/hu.v3s2r10k/*.fastq.gz' --designFile '/project/shared/bicf_workflow_ref/workflow_testdata/cellranger/cellranger_count/hu.v3s2r10k/design.csv' --genome 'GRCh38-3.0.0' --kitVersion '3GEXv3' --version '3.1.0' --outDir 'test'
+  nextflow run workflow/main.nf -profile biohpc,cluster --fastq '/project/shared/bicf_workflow_ref/workflow_testdata/cellranger/cellranger_count/hu.v3s2r10k/*.fastq.gz' --designFile '/project/shared/bicf_workflow_ref/workflow_testdata/cellranger/cellranger_count/hu.v3s2r10k/design.csv' --genome 'GRCh38-3.0.0' --kitVersion '3GEXv3' --version '3.1.0' --outDir 'test'
   ```
 * Design example:
 
diff --git a/workflow/main.nf b/workflow/main.nf
index dbbb15ee3ea5ab39690b928f9882bdd44013f230..18d83246268260621a7dbfdb0018e32d57fc0ad7 100755
--- a/workflow/main.nf
+++ b/workflow/main.nf
@@ -60,7 +60,7 @@ if (params.astrocyte) {
 params.genomeLocationFull = params.genomeLocation+params.genome
 
 // Define variables from input
-pipelineVersion = "2.x.x-indev"
+pipelineVersion = "2.1.0"
 name = params.name
 designLocation = Channel
   .fromPath(params.designFile)
diff --git a/workflow/nextflow.config b/workflow/nextflow.config
index 32b90f699ad2e153e38a1d9d6a914a109ce05c6a..c12146aa1e89c486c84cc5ceb8bbf433303c83a1 100644
--- a/workflow/nextflow.config
+++ b/workflow/nextflow.config
@@ -47,6 +47,6 @@ manifest {
   homePage = 'https://git.biohpc.swmed.edu/BICF/Astrocyte/cellranger_count'
   description = 'This pipeline is a wrapper for the cellranger count tool from 10x Genomics. It takes fastq files from 10x Genomics Single Cell Gene Expression libraries, performs alignment, filtering, barcode counting, and UMI counting. It uses the Chromium cellular barcodes to generate gene-barcode matrices, determine clusters, and perform gene expression analysis.'
   mainScript = 'main.nf'
-  version = '2.x.x-indev'
+  version = '2.1.0'
   nextflowVersion = '>=0.31.0'
 }