diff --git a/workflow/main.nf b/workflow/main.nf index a968f584b35fe85d322e8b4d381d8be5c25cb30c..44ae660f36bf5dbee5a3bf20ad4850a7b8bff04e 100755 --- a/workflow/main.nf +++ b/workflow/main.nf @@ -127,7 +127,7 @@ process count211 { output: file("**/outs/**") into outPaths211 - file("*_metrics_summary.tsv") into metricsSummary + file("*_metrics_summary.tsv") into metricsSummary211 when: version == '2.1.1' @@ -170,7 +170,7 @@ process count301 { output: file("**/outs/**") into outPaths301 - file("*_metrics_summary.tsv") into metricsSummary + file("*_metrics_summary.tsv") into metricsSummary301 when: version == '3.0.1' @@ -213,7 +213,7 @@ process count302 { output: file("**/outs/**") into outPaths302 - file("*_metrics_summary.tsv") into metricsSummary + file("*_metrics_summary.tsv") into metricsSummary302 when: version == '3.0.2' @@ -263,6 +263,7 @@ process versions { """ } +metricsSummary = metricsSummary211.mix(metricsSummary301, metricsSummary302) // Generate MultiQC Report process multiqc {