Commit ce0932d9 authored by Jonathan Gesell's avatar Jonathan Gesell

Merge branch '41-astrocyte-cli' into 'dev'

Add in astrocyte 0.3.1 test.

Closes #41

See merge request !29
parents f2e37d6f 757e0cae
Pipeline #7486 passed with stages
in 656 minutes and 35 seconds
......@@ -18,7 +18,7 @@ user_configuration:
astrocyte:
stage: astrocyte
script:
- module load astrocyte/0.2.0
- module load astrocyte/0.3.1
- module unload nextflow
- cd ..
- astrocyte_cli validate atacseq_analysis
......
......@@ -2,6 +2,10 @@
All notable changes to this project will be documented in this file.
## [Unreleased ]
### Upgraded
- Updated support for astrocyte 0.3.1
## [publish_2.0.3 ] - 2020-06-21
### Fixed
- Removed biosample, factor, treatment from design file
......
......@@ -6,7 +6,7 @@
|[![coverage report](https://git.biohpc.swmed.edu/BICF/Astrocyte/atacseq_analysis/badges/master/coverage.svg)](https://git.biohpc.swmed.edu/BICF/Astrocyte/atacseq_analysis/commits/master)|[![coverage report](https://git.biohpc.swmed.edu/BICF/Astrocyte/atacseq_analysis/badges/dev/coverage.svg)](https://git.biohpc.swmed.edu/BICF/Astrocyte/atacseq_analysis/commits/dev)|
[![Nextflow](https://img.shields.io/badge/nextflow-%E2%89%A50.31.0-brightgreen)](https://www.nextflow.io/)
[![Astrocyte](https://img.shields.io/badge/astrocyte-%E2%89%A50.2.0-blue)](https://astrocyte-test.biohpc.swmed.edu/static/docs/index.html)
[![Astrocyte](https://img.shields.io/badge/astrocyte-%E2%89%A50.3.1-blue)](https://astrocyte-test.biohpc.swmed.edu/static/docs/index.html)
[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.3526148.svg)](https://doi.org/10.5281/zenodo.3526148)
## Introduction
......
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