Issues · BICF / Astrocyte / atacseq_analysis

New issue

map reads fails to make bam files for long reads

#43 · created Jul 28, 2020 by Venkat Malladi bug critical
- CLOSED
- 1
- 1
updated Jul 29, 2020
Update to astrocyte 0.3.1

#42 · created Jun 26, 2020 by Venkat Malladi Version 2.1.0
- CLOSED
- 0
updated Jul 01, 2020
Astrocyte fixes

#40 · created Jun 19, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Jun 21, 2020
Tests for astrocyte

#39 · created Jun 11, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated Jun 18, 2020
Add license

#38 · created Apr 06, 2020 by Venkat Malladi Version 2.0
- CLOSED
- 1
- 0
updated May 07, 2020
Fix runners and sigbus error

#37 · created Mar 31, 2020 by Venkat Malladi
- CLOSED
- 1
- 0
updated May 08, 2020
Annotate peaks

#32 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jun 11, 2020
Blacklist of regions

#31 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jun 09, 2020
TSS enrichment score

#30 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 2
- 0
updated May 28, 2020
Add FRiP score

#29 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 2
- 0
updated May 13, 2020
Add percent of reads - mitochondria

#28 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Mar 24, 2020
Add fragment size distribution

#27 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 2
- 1
updated Jun 09, 2020
Generate MultiQC report

#26 · created Jan 06, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Feb 25, 2020
Fix BioHPC config

#25 · created Jan 06, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jan 07, 2020
fix consensus peaks

#24 · created Jan 03, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jan 07, 2020
Fix call peaks MACs

#23 · created Jan 02, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
updated Jan 07, 2020
Make hg19 test

#22 · created Jan 01, 2020 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 0
updated Jan 06, 2020
Fix concurrent runners

#21 · created Dec 20, 2019 by Venkat Malladi
- CLOSED
- 4
updated May 28, 2020
Fix Pool and Pseudoreps

#20 · created Dec 20, 2019 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jan 03, 2020
Fix cross correlation

#19 · created Dec 19, 2019 by Holly Ruess Version 2.0 enhancment
- CLOSED
- 1
- 0
updated Jan 03, 2020