Issues · BICF / Astrocyte / atacseq_analysis

New issue

Annotate peaks

#32 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
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updated Jun 11, 2020
Blacklist of regions

#31 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
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updated Jun 09, 2020
Add fragment size distribution

#27 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
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updated Jun 09, 2020
TSS enrichment score

#30 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
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updated May 28, 2020
Add FRiP score

#29 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
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updated May 13, 2020
Add percent of reads - mitochondria

#28 · created Jan 09, 2020 by Holly Ruess Version 2.0 enhancment
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updated Mar 24, 2020
Generate MultiQC report

#26 · created Jan 06, 2020 by Holly Ruess Version 2.0 enhancment
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updated Feb 25, 2020
Fix BioHPC config

#25 · created Jan 06, 2020 by Holly Ruess Version 2.0 enhancment
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updated Jan 07, 2020
Fix call peaks MACs

#23 · created Jan 02, 2020 by Holly Ruess Version 2.0 enhancment
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updated Jan 07, 2020
fix consensus peaks

#24 · created Jan 03, 2020 by Holly Ruess Version 2.0 enhancment
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updated Jan 07, 2020
Make hg19 test

#22 · created Jan 01, 2020 by Holly Ruess Version 2.0 enhancment
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updated Jan 06, 2020
Fix Pool and Pseudoreps

#20 · created Dec 20, 2019 by Holly Ruess Version 2.0 enhancment
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updated Jan 03, 2020
Fix cross correlation

#19 · created Dec 19, 2019 by Holly Ruess Version 2.0 enhancment
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updated Jan 03, 2020
deeptools version 3 error

#2 · created May 11, 2018 by Spencer Barnes Version 2.0 enhancment
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updated Jan 02, 2020
Change output from png to pdf

#11 · created May 10, 2019 by Holly Ruess Version 2.0 enhancment
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updated Jan 02, 2020
Fix Convert Reads

#18 · created Dec 18, 2019 by Holly Ruess Version 2.0 enhancment
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updated Dec 27, 2019
Fix Experiment QC

#17 · created Dec 18, 2019 by Holly Ruess Version 2.0 enhancment
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updated Dec 20, 2019
Fix Filter Reads

#15 · created Dec 12, 2019 by Holly Ruess Version 2.0 enhancment
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updated Dec 18, 2019
Fix Align Reads

#16 · created Dec 12, 2019 by Holly Ruess Version 2.0 enhancment
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updated Dec 16, 2019
Fix Trim Reads

#14 · created Dec 09, 2019 by Holly Ruess Version 2.0 enhancment
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updated Dec 11, 2019