From e0b2dbfa3d7ed37003d23a35e275c34775ca9acc Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Wed, 27 Jun 2018 10:48:40 -0500
Subject: [PATCH] Fix convert reads.
---
workflow/scripts/convert_reads.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/scripts/convert_reads.py b/workflow/scripts/convert_reads.py
index 400b916..f792879 100644
--- a/workflow/scripts/convert_reads.py
+++ b/workflow/scripts/convert_reads.py
@@ -165,7 +165,7 @@ def main():
if tn5:
logger.info("TN5-shifting TAGALIGN...")
- tn5_shift_ta(tag_filename, shitfted_tag_filename)
+ tn5_shift_tagalign(tag_filename, shitfted_tag_filename)
else:
tn5_shift = ["cp %s %s" % (tag_filename, shitfted_tag_filename)]
out, err = utils.run_pipe(tn5_shift)
--
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