diff --git a/workflow/main.nf b/workflow/main.nf index 31c66ee6f70f5e429d0185f9a0f3fdbb95415540..a7413dcf6ccf3625b3dee09cccaab6a7d0b2e659 100644 --- a/workflow/main.nf +++ b/workflow/main.nf @@ -507,9 +507,8 @@ process consensusPeaks { file preDiffDesign output: - file '*.replicated.*' into consensusPeaks - file '*.rejected.*' into rejectedPeaks - file '*.replicated_noblacklist*' optional true into blPeaks + file '*replicated*' into consensusPeaks + file '*rejected*' into rejectedPeaks file("design_exQC.tsv") into designExperimentQC file('version_*.txt') into consensusPeaksVersions file("design_annotatePeaks.tsv") into designAnnotatePeaks diff --git a/workflow/tests/test_experiment_qc.py b/workflow/tests/test_experiment_qc.py index 07328e442af6dbce921419551fa80363095f69a8..0c4d7ee504c08c4cc047560479a9a6b88dab12e7 100644 --- a/workflow/tests/test_experiment_qc.py +++ b/workflow/tests/test_experiment_qc.py @@ -56,7 +56,7 @@ def test_coverage_pairedend_mouse(): def test_FRiP_pairedend_mouse(): FRiPscore = test_output_path + 'ENCLB122XDP.FRiPscore.tsv' df_FRiPscore = pd.read_csv(FRiPscore, sep='\t') - assert round(df_FRiPscore["FRiP_score"].iloc[0],6) == 0.267798 + assert round(df_FRiPscore["FRiP_score"].iloc[0],6) == 0.256600 @pytest.mark.pairedend_mouse def test_TSSenrich_pairedend_mouse():