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BICF
Astrocyte
atacseq_analysis
Commits
405b2045
Commit
405b2045
authored
Jun 09, 2020
by
Holly Ruess
Browse files
fix errors
parent
ae1c1465
Pipeline
#7104
failed with stages
in 469 minutes and 12 seconds
Changes
2
Pipelines
1
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workflow/main.nf
View file @
405b2045
...
...
@@ -509,6 +509,7 @@ process consensusPeaks {
output:
file '*.replicated.*' into consensusPeaks
file '*.rejected.*' into rejectedPeaks
file '*.replicated_noblacklist*' optional true into blPeaks
file("design_exQC.tsv") into designExperimentQC
file('version_*.txt') into consensusPeaksVersions
file("design_annotatePeaks.tsv") into designAnnotatePeaks
...
...
workflow/tests/test_annotate_peaks.py
View file @
405b2045
...
...
@@ -18,7 +18,7 @@ def test_annotation_singleend_human():
annotation_file
=
test_output_path
+
'ENCSR265ZXX.chipseeker_annotation.tsv'
assert
os
.
path
.
exists
(
annotation_file
)
assert
utils
.
count_lines
(
annotation_file
)
>=
116
163
assert
utils
.
count_lines
(
annotation_file
)
>=
116
025
@
pytest
.
mark
.
pairedend_mouse
...
...
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